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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs10888650 chr1:39507161 C/T NDUFS5 chr1:39491990-39500308:+ 0.47 5.24 2.95E-6 Box Plot
ACC rs10889425 chr1:63973454 T/C ITGB3BP chr1:63906441-64059392:- 0.61 6.4 4.48E-8 Box Plot
ACC rs10899053 chr11:74710042 T/C XRRA1 chr11:74518784-74660245:- 0.7 5.81 3.81E-7 Box Plot
ACC rs10899054 chr11:74721673 G/A XRRA1 chr11:74518784-74660245:- 0.67 5.42 1.56E-6 Box Plot
ACC rs10899060 chr11:74746631 C/T XRRA1 chr11:74518784-74660245:- 0.94 5.8 3.93E-7 Box Plot
ACC rs10927361 chr1:245140654 C/T EFCAB2 chr1:245133007-245290466:+ 0.6 5.68 6.11E-7 Box Plot
ACC rs10934674 chr3:93812793 G/T STX19 chr3:93733213-93747454:- 0.78 6.6 2.16E-8 Box Plot
ACC rs10944128 chr6:86180732 A/C SNHG5 chr6:86370668-86388454:- 0.65 6.98 5.33E-9 Box Plot
ACC rs11051213 chr12:31190931 C/G DDX11 chr12:31226779-31257725:+ 0.73 6.71 1.44E-8 Box Plot
ACC rs11051220 chr12:31202146 T/C DDX11 chr12:31226779-31257725:+ 0.74 6.43 3.99E-8 Box Plot
ACC rs11079796 chr17:45903554 C/A SP6 chr17:45922274-45933240:- 0.63 5.54 1.0E-6 Box Plot
ACC rs11080393 chr18:10205457 A/G RALBP1 chr18:9475007-9538114:+ 0.88 5.69 6.01E-7 Box Plot
ACC rs11083627 chr19:42069900 A/G CEACAM21 chr19:42055886-42093197:+ 0.8 6.43 3.95E-8 Box Plot
ACC rs11083628 chr19:42077832 G/A CEACAM21 chr19:42055886-42093197:+ 0.77 6.21 8.93E-8 Box Plot
ACC rs11084151 chr19:52885324 T/C ZNF880 chr19:52873170-52889048:+ 0.81 7.16 2.79E-9 Box Plot